BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C03SP1|AL428867
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1567 1730 0.0
>3x_Contig1567
Length = 11673
Score = 1730 bits (872), Expect = 0.0
Identities = 880/882 (99%), Gaps = 1/882 (0%)
Strand = Plus / Minus
Query: 1 tagcgtctgataggaatccctgggcggcas-tccttcctttttggctacagaagggtttc 59
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1594 tagcgtctgataggaatccctgggcggcagctccttcctttttggctacagaagggtttc 1535
Query: 60 tttcacgttctgcttctattctctcacgttcttccttacgtctttcttctagttgatccc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tttcacgttctgcttctattctctcacgttcttccttacgtctttcttctagttgatccc 1475
Query: 120 tagtaatcaacccgatctgaacattttgttcatcggatctcgtatattcagcatgagacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tagtaatcaacccgatctgaacattttgttcatcggatctcgtatattcagcatgagacc 1415
Query: 180 acttatgagcagcttccccaggcttatattcgatccatgagttccctgttggatcatcta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 acttatgagcagcttccccaggcttatattcgatccatgagttccctgttggatcatcta 1355
Query: 240 taacgaaagttatgggcaaagtaccatctttgcatgcgattgtgtcctttactttgtcaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 taacgaaagttatgggcaaagtaccatctttgcatgcgattgtgtcctttactttgtcaa 1295
Query: 300 taaatgcctggatctggtcgtataatggcttgtcgatcttctctcttaaaggctgatcac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 taaatgcctggatctggtcgtataatggcttgtcgatcttctctcttaaaggctgatcac 1235
Query: 360 tttccaaatcatccaccatttcacttagtagaccttctacagtagtgagctgtccacgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 tttccaaatcatccaccatttcacttagtagaccttctacagtagtgagctgtccacgtt 1175
Query: 420 tccctgggatttcaagatctaattccacgaacttacagctagcagtctcagacttgatga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 tccctgggatttcaagatctaattccacgaacttacagctagcagtctcagacttgatga 1115
Query: 480 cttgtctgttgaaatcgtccttctcttccactttcaacatgtatttagaacccttctctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 cttgtctgttgaaatcgtccttctcttccactttcaacatgtatttagaacccttctctt 1055
Query: 540 ggatctcagaagcaggctggatctcacaattcttgaaaccacagtgttcacaggcgaaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 ggatctcagaagcaggctggatctcacaattcttgaaaccacagtgttcacaggcgaaag 995
Query: 600 acataagaactacttctctaaagtaaggaatcctcgtcaacaataatctggtagtaccca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 acataagaactacttctctaaagtaaggaatcctcgtcaacaataatctggtagtaccca 935
Query: 660 ttttatgacagttcatacataaggatggaatttcctgtactggatgacccatagcatcaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 ttttatgacagttcatacataaggatggaatttcctgtactggatgacccatagcatcaa 875
Query: 720 aggcaccggtttgaactaacccagtatcatctgcctggttttctccgttttgagttgtac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 aggcaccggtttgaactaacccagtatcatctgcctggttttctccgttttgagttgtac 815
Query: 780 cctgttgcccctcattggcatgttcagcgtcttctacaatctcaccaactggtttaaata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 cctgttgcccctcattggcatgttcagcgtcttctacaatctcaccaactggtttaaata 755
Query: 840 agtcttctggcatgttgttcaaaaagcgtgaattattaaatt 881
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agtcttctggcatgttgttcaaaaagcgtgaattattaaatt 713
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5509
Number of Sequences: 1807
Number of extensions: 5509
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)